Editing Nanopore RNA Sequencing Protocol (section)

=====Probing Genes=====

Now we want to be able to visualize the data, preferably between two samples. This next code block can be executed directly in ''R'', all you have to do is change the first set of values to indicate which gene you want to probe and your samples you want to include.

<code>R</code>
<syntaxhighlight lang="R">
# Define your parameters. Note that your sample IDs are the same as above.
GENE="ATF5"
SAMPLE1_ID="FAR91556" # Usually WT
SAMPLE2_ID="FAM95931" # Usually Mut

# Code to run
</syntaxhighlight>